Understanding Intestinal Development and Disease in Infants

This study is looking at how the intestines develop normally in babies and how intestinal diseases, like necrotizing enterocolitis (NEC), affect them. Researchers want to understand more about human intestinal development because most current research uses mice, which aren't always the best comparison for humans. This is an observational study, meaning you wouldn't receive any new treatments. Instead, researchers would collect information from babies up to 2 years old who are already having intestinal surgery or biopsies. They will measure things like the number of certain cells in the intestine, changes in the immune system, and the types of good bacteria in stool samples. The goal is to improve our overall understanding of these important areas. The study plans to enroll 100 participants, but its current status is unclear.

Study design
This is an observational study, meaning no new treatments are given. It aims to enroll 100 participants.
What's involved
Participation involves providing intestinal tissue samples during a planned surgery or biopsy, and a stool sample within 48 hours of that procedure.
Compensation
Not stated in the trial record.
Follow-up
Not specified.

AI-generated from the public study record. Only the study team can confirm whether you're eligible — confirm details with them before making decisions.

NCT06681129

Study of Normal Intestinal Development and Disease in Premature and Term Neonates

Recruiting
Not specifiedUp to 2Observational
Boston Children's Hospital
~100 participants
Updated 2026-03-27 on ClinicalTrials.gov

At a glance

Recruiting sites
1 of 1 listed site is recruiting right now
RecruitingSuspended, closed, or not yet open
What they're measuring
Number of intestinal stem cells and mature epithelial cells
Measured over At the time of surgery for another clinical problem.
+2 more outcomes measured
NEC
Necrotizing Enterocolitis
Intestinal Disease
Human Development
1 sites across 1 states
Massachusetts1
  • Amy O'Connell, MD, PhD · PRINCIPAL_INVESTIGATOR · Boston Children's Hospital

Opens a ready-to-send draft in your own email app — review before sending.

Do you actually qualify for this trial?

Add a private profile and we'll compare every criterion below against your situation — and tell you which ones are met, uncertain, or excluding.

Check eligibility for this trial ~2 min · HIPAA-protected · delete anytime
Eligibility criteria

Inclusion

Any neonate or infant through 2 years of age having intestinal surgery or intestinal biopsies from an esophogastroduodenoscopy (EGD) or colonoscopy.

Exclusion

Children \> 2 years of age.
Infants 0-2 years old not undergoing GI surgery or intestinal scope with biopsy procedure.
  • Number of intestinal stem cells and mature epithelial cellsAt the time of surgery for another clinical problem.

    Small intestinal biopsy specimens will be collected either from discarded surgical biopsies collected for clinical reasons or from 1-2 additional small bunch biopsies (5mm) near the surgery site. The tissue will be used to 1.) generate organoids for longitudinal cell culture, 2.) analyze RNA or protein components by transcriptomic or cellular analyses or 3.) analyze histology. We do not have discrete planned outcomes because this is an investigational study and we are looking for new trends or differences.

  • Degree of Immune System ChangesWithin 48 hours before or after the clinically-driven surgery.

    We will collect a small 1 tsp amount of blood (5mL) and use this to analyze immune cell types or cytokines in the blood. These will include monocytes, T cell, B cells, and neutrophils for the cell types. Cytokines will include IL-1, IL-2, IL-3, IL-4, Il-5, IL-6, Il-8, IL10, IL-13, IL-22, IL-33, TNFa, IFNg, IFNa, MCP1, MIP1a.

  • Fraction of Stool Microbiome that has beneficial microbesWithin 48 hours before or after the surgery from which the biopsy is obtained.

    We will collect stool samples to analyze the microbiome using bulk microbial RNA sequencing.